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1.
Front Microbiol ; 15: 1324833, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38562481

RESUMEN

Introduction: White Hypsizygus marmoreus is a popular edible mushroom. It is rich in nutrition and flavor but vulnerable to fungal disease, resulting in nutrient loss and aging. Methods: In this study, the pathogenic fungus Trichoderma spp. BBP-6 and its antagonist Bacillus sp. 1-23 were isolated and identified. The negative effects caused by this pathogen were judged by detecting a series of changes in the infected white H. marmoreus. The effects of Bacillus sp. 1-23 on Trichoderma spp. BBP-6 and the infected white H. marmoreus were detected. The effect of Bacillus sp. 1-23 treatment combined with salicylic acid (SA) was also considered. Results: The results showed that Trichoderma spp. BBP-6 could affect the activities of antioxidant enzymes PAL, POD, CAT, SOD, GR, PPO, and APX to interfere with the stability of the white H. marmoreus antioxidant enzyme system and cause the mushroom severe browning and nutrition loss, as well as general quality deterioration. Bacillus sp. 1-23 could produce chitinase and chitosanase enzymes to inhibit Trichoderma spp. BBP-6 directly. SA reinforced this inhibitory. Bacillus sp. 1-23 alone or combined with SA could help white H. marmoreus from the Trichoderma spp. BBP-6 infection to effectively maintain nutrients, restore and stabilize the antioxidant system, and reduce the production of malondialdehyde, superoxide anion and hydrogen peroxide. Discussion: Thus, such treatments could be considered potential methods to alleviate damage from disease and extend the shelf life of white H. marmoreus.

2.
Opt Express ; 31(24): 40730-40740, 2023 Nov 20.
Artículo en Inglés | MEDLINE | ID: mdl-38041365

RESUMEN

Semi-quantum key distribution (SQKD) protocols are used to distribute secret keys between a quantum party and a classical party. However, existing SQKD protocols rely on two-way communication, and may still be vulnerable to Trojan horse side-channel attacks where Eve sends her own photon into a receiver's apparatus and measures the reflected photon to estimate the key. In this paper, we propose a practical SQKD with one-way key. This requires that the single photons travelling through the one-way channel are used to encode bit information, and the returned photons are used to quantify Eve's information, thus reducing the security analysis of the Trojan horse attack in SQKD. Meanwhile, our protocol with one basis enjoys security advantage in practical SQKD systems when source flaws are taken into account. In particular, the present protocol is secure under practical conditions when weak coherent pulses (WCP) are used. Our simulation results show that the protocol using WCP can distribute secret keys over a distance of 110 km without decoy states.

3.
PeerJ ; 11: e15681, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37953782

RESUMEN

To investigate changes in fungal community characteristics under different Cr(VI) concentration stresses and the advantages of adding arbuscular mycorrhizal fungi (AMF), we used high throughput sequencing to characterize the fungal communities. Cr(VI) stress reduced rhizosphere soil SOM (soil organic matter) content and AMF addition improved this stress phenomenon. There were significant differences in fungal community changes under different Cr(VI) concentrations. The fungal community characteristics changed through inhibition of fungal metabolic ability, as fungal abundance increased after AMF addition, and the fungal diversity increased under high Cr(VI) concentration. The dominant phyla were members of the Ascomycota, Basidiomycota, Mortierellomycota, and Rozellomycota. Dominant groups relevant to Cr resistance were Ascomycota and Basidiomycota fungi. Moreover, Fungal community characteristics were analyzed using high-throughput sequencing of the cytochrome c metabolic pathway, NADH dehydrogenase, and NADH: ubiquinone reductase and all these functions were enhanced after AMF addition. Therefore, Cr(VI) stress significantly affects fungal community structure, while AMF addition could increase its SOM content, and metabolic capacity, and improve fungal community tolerance to Cr stress. This study contributed to the understanding response of rhizosphere fungal community in AMF-assisted wetland phytoremediation under Cr stress.


Asunto(s)
Acorus , Micobioma , Micorrizas , Micorrizas/genética , Rizosfera , Raíces de Plantas/microbiología , Suelo/química
4.
J Obstet Gynaecol ; 43(1): 2204162, 2023 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-37089113

RESUMEN

This study aimed to investigate the predictive value of coagulation, thromboelastography, stress response, and immune function indicators for the occurrence of deep venous thrombosis (DVT) following radical resection of cervical cancer and ovarian cancer. We conducted a prospective, single-centre, case-control study that included 230 cervical cancer patients and 230 ovarian cancer patients. In the testing cohort, the final predictive model for cervical cancer patients was: Logit(P)=9.365-0.063(R-value)-0.112(K value) +0.386(α angle)+0.415(MA)+0.276(FIB)+0.423(D-D)+0.195(IL-6)+0.092(SOD). For ovarian cancer patients, the final model was: Logit(P)= -2.846-0.036(R-value)-0.157(K value) +0.426(α angle) +0.172(MA) +0.221(FIB)+0.375(CRP) -0.126(CD4+/CD8+). In the validation cohort, these models exhibited good predictive efficiency, with a false-positive rate of 12.5% and a false-negative rate of 2.9% for cervical cancer patients, and a false-positive rate of 14.3% and a false-negative rate of 0% for ovarian cancer patients. In conclusion, the risk prediction models developed in this study effectively improve the predictive accuracy of DVT following radical resection of cervical and ovarian cancer.


Asunto(s)
Neoplasias Ováricas , Neoplasias del Cuello Uterino , Trombosis de la Vena , Humanos , Femenino , Tromboelastografía , Neoplasias del Cuello Uterino/cirugía , Estudios de Casos y Controles , Estudios Prospectivos , Neoplasias Ováricas/cirugía , Trombosis de la Vena/etiología , Inmunidad
5.
Heliyon ; 9(2): e13719, 2023 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-36879753

RESUMEN

Compared with the traditional BB84 protocol, the counterfactual quantum key distribution (QKD) does not rely on any signal travelling in the quantum channel, and therefore can present a security advantage where Eve cannot fully access signal. However, the practical system may be damaged in a scenario where the devices are untrusted. In this paper, we analyze the security of counterfactual QKD in untrusted detectors scenario. We show that the requirement to disclose "which detector clicked" has become the main loophole in all counterfactual QKD versions. An eavesdropping scheme which is similar to the memory attack on device-independent QKD could break its security by exploiting detectors' imperfections. We consider two different counterfactual QKD protocols and analyze their security against this major loophole. One is a modified Noh09 protocol, which would be secure in untrusted detectors context. Another is a variant of counterfactual QKD with high efficiency (Phys. Rev. A 104 (2021) 022424) against a series of detectors side-channel attacks as well as against other attacks that exploit detectors imperfections.

6.
J Fungi (Basel) ; 9(2)2023 Feb 08.
Artículo en Inglés | MEDLINE | ID: mdl-36836339

RESUMEN

(1) Background: The Hypsizygus marmoreus is a popular edible mushroom in East Asian markets. In a previous study, we reported the proteomic analyses of different developmental stages of H. marmoreus, from primordium to mature fruiting body. However, the growth and protein expression changes from scratching to primordium are unclear. (2) Methods: A label-free LC-MS/MS quantitative proteomic analysis technique was adopted to obtain the protein expression profiles of three groups of samples collected in different growth stages from scratching to the tenth day after scratching. The Pearson's correlation coefficient analysis and principal component analysis were performed to reveal the correlation among samples. The differentially expressed proteins (DEPs) were organized. Gene Ontology (GO) analysis was performed to divide the DEPs into different metabolic processes and pathways. (3) Results: From the 3rd day to the 10th day after scratching, mycelium recovered gradually and formed primordia. Compared with the Rec stage, 218 highly expressed proteins were identified in the Knot stage. Compared with the Pri stage, 217 highly expressed proteins were identified in the Rec stage. Compared with the Pri stage, 53 highly expressed proteins were identified in the Knot stage. A variety of the same highly expressed proteins were identified in these three developmental stages, including: glutathione S-transferase, acetyltransferase, importin, dehydrogenase, heat-shock proteins, ribosomal proteins, methyltransferase, etc. The key pathways in the development of H. marmoreus are metabolic process, catabolic process, oxidoreductase activity and hydrolase activity. DEPs in the Knot or Pri stages compared with the Rec stage were significantly decreased in the metabolic-, catabolic- and carbohydrate-related process; and the oxidoreductase, peptidase, and hydrolase activity, which can serve as targets for selectable molecular breeding in H. marmoreus. A total of 2000 proteins were classified into eight different modules by WGCNA, wherein 490 proteins were classified into the turquoise module. (4) Conclusions: Generally, from the 3rd day to the 10th day after scratching, mycelium recovered gradually and formed primordia. Importin, dehydrogenase, heat-shock proteins, ribosomal proteins, transferases were all highly expressed in these three developmental stages. DEPs in the Rec stage compared with the Knot or Pri stages were significantly enriched in the metabolic-, catabolic- and carbohydrate-related process; and in oxidoreductase, peptidase and hydrolase activities. This research contributes to the understanding of the mechanisms of the development changes before primordium of H. marmoreus.

7.
J Obstet Gynaecol Res ; 49(1): 296-303, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36220631

RESUMEN

BACKGROUND: The pathological phenotype of early-stage cervical cancer (CC) is similar to that of cervical intraepithelial neoplasia (CIN), which provides a challenge for the diagnosis of cervical precancerous lesions. Meanwhile, the existing diagnostic methods have certain subjectivity and limitations, resulting in the possibility of misdiagnosis or missed diagnosis. Hence, some methods are needed to assist diagnosis of CC and CIN. METHODS: Based on the data of CIN and CC in gene expression omnibus (GEO) dataset, the eXtreme Gradient Boosting (XGBoost) algorithm was used to screen the feature genes between CIN and CC for constructing the classifier. Incremental feature selection (IFS) curve was also used for screening. The classifier was validated for reliability using principal component analysis (PCA) dimensionality reduction analysis and heat map analysis of gene expression. Then, differentially expressed genes of CIN and CC were intersected with the classifier genes. Genes in the intersection were used as seeds for protein-protein interaction network construction and restart random walk analysis. And the genes with the top 50 affinity coefficients were selected for gene ontology (GO) and kyoto encyclopedia of genes and genome (KEGG) enrichment analyses to observe the biological functions with differences between CIN and CC. RESULTS: The peripheral blood genes of CIN and CC were analyzed, and seven genes were screened. Using this gene for classifier construction, IFS curve screening revealed that the three-feature gene classifier constructed according to the random forest model had the best effect. The results of PCA dimensionality reduction analysis and gene expression heat map analysis showed that the three-gene classifier could effectively distinguish CIN from CC. CONCLUSION: A three-gene diagnostic classifier can effectively distinguish CIN patients from CC patients and provide a reference for the clinical diagnosis of early CC.


Asunto(s)
Displasia del Cuello del Útero , Neoplasias del Cuello Uterino , Humanos , Femenino , Neoplasias del Cuello Uterino/diagnóstico , Neoplasias del Cuello Uterino/genética , Bosques Aleatorios , Reproducibilidad de los Resultados , Displasia del Cuello del Útero/diagnóstico , Cuello del Útero
8.
Geobiology ; 21(1): 44-65, 2023 01.
Artículo en Inglés | MEDLINE | ID: mdl-36200974

RESUMEN

Most Neoproterozoic iron formations (NIF) are closely associated with global or near-global "Snowball Earth" glaciations. Increasingly, however, studies indicate that some NIFs show no robust evidence of glacial association. Many aspects of non-glacial NIF genesis, including the paleo-environmental setting, Fe(II) source, and oxidation mechanisms, are poorly understood. Here, we present a detailed case study of the Jiapigou NIF, a major non-glacial NIF within a Neoproterozoic volcano-sedimentary sequence in North Qilian, northwestern China. New U-Pb geochronological data place the depositional age of the Jiapigou NIF at ~600 Ma. Petrographic and geochemical evidence supports its identification as a primary chemical sediment with significant detrital input. Major and trace element concentrations, REE + Y systematics, and εNd (t) values indicate that iron was sourced from mixed seawater and hydrothermal fluids. Iron isotopic values (δ56 Fe = -0.04‰-1.43‰) are indicative of partial oxidation of an Fe(II) reservoir. We infer that the Jiapigou NIF was deposited in a redox stratified water column, where hydrothermally sourced Fe(II)-rich fluids underwent oxidation under suboxic conditions. Lastly, the Jiapigou NIF has strong phosphorous enrichments, which in other iron formations are typically interpreted as signals for high marine phosphate concentrations. This suggests that oceanic phosphorus concentrations could have been enriched throughout the Neoproterozoic, as opposed to simply during glacial intervals.


Asunto(s)
Hierro , Agua de Mar , Hierro/análisis , Océanos y Mares , Planeta Tierra , Fósforo , Compuestos Ferrosos , Sedimentos Geológicos
9.
Front Microbiol ; 14: 1259101, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-38163081

RESUMEN

Cyclosporine A (CsA) is a secondary cyclopeptide metabolite produced by Tolypocladium inflatum that is widely used clinically as an immunosuppressant. CsA production and mycelial growth differed when T. inflatum was cultured in different carbon source media. During early fermentation, CsA was preferred to be produced in fructose medium, while the mycelium preferred to accumulate in sucrose medium. On the sixth day, the difference was most pronounced. In this study, high-throughput comparative proteomics methods were applied to analyze differences in protein expression of mycelial samples on day 6, revealing the proteins and mechanisms that positively regulate CsA production related to carbon metabolism. The differences included small molecule acid metabolism, lipid metabolism, organic catabolism, exocrine secretion, CsA substrate Bmt synthesis, and transcriptional regulation processes. The proteins involved in the regulation of mycelial growth related to carbon metabolism were also revealed and were associated with waste reoxidation processes or coenzyme metabolism, small molecule synthesis or metabolism, the stress response, genetic information or epigenetic changes, cell component assembly, cell wall integrity, membrane metabolism, vesicle transport, intramembrane localization, and the regulation of filamentous growth. This study provides a reliable reference for CsA production from high-efficiency fermentation. This study provides key information for obtaining more CsA high-yielding strains through metabolic engineering strategies.

10.
Sensors (Basel) ; 22(19)2022 Sep 25.
Artículo en Inglés | MEDLINE | ID: mdl-36236361

RESUMEN

Marine sediment transport is closely related to seafloor topography, material transport, marine engineering safety, etc. With a developed time-series vector observation device, the sediment capture and transport process can be observed. The structure of the capture tube and the internal filter screen can significantly affect the flow field during the actual observation, further influencing the sediment transport observation and particle capture process. This paper presents a numerical model for investigating the effect of device structure on seawater flow to study the processes of marine sediment transport observation and sediment particle capture. The model is based on the solution of both porous media and the Realizable k-ε turbulence in Fluent software. The flow velocity distribution inside and outside the capture tube with different screen pore sizes (0.300, 0.150, and 0.075 mm) is analyzed. To enhance the reliability of the numerical simulation, the simulation calculation results are compared with the test results and have good coincidence. Finally, by analyzing the motion law of sediment in the capture tube, the accurate capture of sediment particles is achieved, and the optimal capture efficiency of the sediment trap is obtained.


Asunto(s)
Sedimentos Geológicos , Programas Informáticos , Simulación por Computador , Sedimentos Geológicos/química , Porosidad , Reproducibilidad de los Resultados
11.
J Oncol ; 2022: 3850674, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35909904

RESUMEN

Background: Many studies have demonstrated the promising utility of DNA methylation and miRNA as biomarkers for colorectal cancer (CRC) early detection. However, mRNA is rarely reported. This study aimed to identify novel fecal-based mRNA signatures. Methods: The differentially expressed genes (DEGs) were first determined between CRCs and matched normal samples by integrating multiple datasets. Then, Least Absolute Shrinkage and Selection Operator (LASSO) regression was used to reduce the number of candidates of aberrantly expressed genes. Next, the potential functions were investigated for the candidate signatures and their ability to detect CRC and pan-cancers was comprehensively evaluated. Results: We identified 1841 common DEGs in two independent datasets. Functional enrichment analysis revealed they were mainly related to extracellular structure, biosynthesis, and cell adhesion. The CRC classifier was established based on six genes screened by LASSO regression. Sensitivity, specificity, and area under the ROC curve (AUC) for CRC detection were 79.30%, 80.40%, and 0.85 (0.76-0.92) in the training set, and these indexes achieved 93.20%, 41.80%, and 0.73 (0.65-0.83) in the testing set. For validation set, the sensitivity, specificity, and AUC were 98.90%, 98.00%, and 0.97 (0.94-0.99). The average sensitivities exceeded 90.00% for CRCs with different clinical features. For adenomas detection, the sensitivity and specificity were 74.50% and 64.00%. Besides, the six genes obtained an average AUC of 0.855 for pan-cancer detection. Conclusion: The six-gene signatures showed ability to detect CRC and pan-cancer samples, which could be served as potential diagnostic markers.

12.
J Fungi (Basel) ; 8(7)2022 Jun 21.
Artículo en Inglés | MEDLINE | ID: mdl-35887408

RESUMEN

BACKGROUND: Pleurotus ostreatus is a popular edible mushroom in East Asian markets. Research on the responses of P. ostreatus under different carbon dioxide concentrations is limited. METHODS: Label-free LC-MS/MS quantitative proteomics analysis technique was adopted to obtain the protein expression profiles of P. ostreatus fruiting body pileus collected under different carbon dioxide concentrations. The Pearson correlation coefficient analysis and principal component analysis were performed to reveal the correlation among samples. The differentially expressed proteins (DEPs) were organized. Gene ontology analysis was performed to divide the DEPs into different metabolic processes and pathways. RESULTS: The expansion of stipes was inhibited in the high CO2 group compared with that in the low CO2 group. There were 415 DEPs (131 up- and 284 down-regulated) in P. ostreatus PH11 treated with 1% CO2 concentration compared with P. ostreatus under atmospheric conditions. Proteins related to hydrolase activity, including several amidohydrolases and cell wall synthesis proteins, were highly expressed under high CO2 concentration. Most of the kinases and elongation factors were significantly down-regulated under high CO2 concentration. The results suggest that the metabolic regulation and development processes were inhibited under high CO2 concentrations. In addition, the sexual differentiation process protein Isp4 was inhibited under high CO2 concentrations, indicating that the sexual reproductive process was also inhibited under high CO2 concentrations, which is inconsistent with the small fruiting body pileus under high CO2 concentrations. CONCLUSIONS: This research reports the proteome analysis of commercially relevant edible fungi P. ostreatus under different carbon dioxide concentrations. This study deepens our understanding of the mechanism for CO2-induced morphological change in the P. ostreatus fruiting body, which will facilitate the artificial cultivation of edible mushrooms.

13.
Front Plant Sci ; 13: 905358, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35646046

RESUMEN

The plant nutrient acquisition strategies are diverse, such as root nutrient acquisition and leaf nutrient resorption, playing important roles in driving soil processes, vegetation performance as well as ecosystem nutrient cycling. However, it is still in a debate whether there is a synergy or tradeoff between above- and below-ground nutrient acquisition strategy under nitrogen (N) and phosphorus (P) addition, or with stand age. Herein, this study investigated the responses of root-soil accumulation factor (RSAF) and leaf nutrient resorption efficiency (NuRE) to long-term N and P fertilization, and further explored the trade-off between them in Metasequoia glyptostroboides plantations with different stand age. Results showed that under N fertilization in young plantations, leaf N resorption efficiency (NRE) increased, and root-soil accumulation factor for P (RSAF-P) decreased. For young forests under P fertilization, the NRE increased whereas RSAF-P decreased. For middle-aged forests under P fertilization, the NRE and leaf P resorption efficiency (PRE) increased and the RSAF-P decreased. Under P fertilization in young and middle-aged plantations, PRE had a significant positive correlation with RSAF-P. Under N fertilization in young plantations, NRE was significantly positive correlated with root-soil accumulation factor for N (RSAF-N). The covariance-based structural equation modeling (CB-SEM) analysis indicated that stand age had positive effects on PRE whether under N or P fertilization, as well as on RSAF-P under N fertilization, whereas had no effects on the NRE or RSAF-N. Overall, our results can shed light on the nutrient acquisition strategies of M. glyptostroboides plantations under future environmental changes and the results could be applied to the nutrient management practices.

14.
Nat Prod Res ; 36(6): 1529-1535, 2022 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-33771063

RESUMEN

Two new lanostane-type triterpenoids, ganoderenicfys A (1) and B (2), together with six related known terpenoids (3-8), were isolated and identified from the fruiting body of Ganoderma applanatum. The structures of these compounds were established on the basis of detailed interpretation of their NMR and HRESIMS data. The absolute configurations of 1 and 2 were determined by quantum chemical electronic circular dichroism (ECD) calculations. All of the isolated compounds were evaluated for their proangiogenic activities in a transgenic fluorescent zebrafish model. Compounds 1-6 displayed dose-dependently proangiogenic activity in a PTK787-induced vascular injury zebrafish model, while compounds 1, 2 and 4 significantly promoted the angiogenesis. This is the first report for proangiogenic activities of lanostane-type triterpenoids.


Asunto(s)
Ganoderma , Triterpenos , Animales , Cuerpos Fructíferos de los Hongos/química , Ganoderma/química , Estructura Molecular , Triterpenos/química , Pez Cebra
15.
J Fungi (Basel) ; 7(12)2021 Dec 11.
Artículo en Inglés | MEDLINE | ID: mdl-34947046

RESUMEN

(1) Background: The white Hypsizygus marmoreus is a popular edible mushroom in East Asia markets. Research on the systematic investigation of the protein expression changes in the cultivation process of this mushroom are few. (2) Methods: Label-free LC-MS/MS quantitative proteomics analysis technique was adopted to obtain the protein expression profiles of six groups of samples collected in different growth stages. A total of 3468 proteins were identified. The UpSetR plot analysis, Pearson correlation coefficient (PCC) analysis, and principal component (PC) analysis were performed to reveal the correlation among the six groups of samples. The differentially expressed proteins (DEPs) were organised by One-way ANOVA test and divided into four clusters. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis were performed to divide the DEPs into different metabolic processes and pathways in each cluster. (3) Results: The DEPs in cluster 1 are of the highest abundance in the mycelium and are mainly involved in protein biosynthesis, biosynthesis of cofactors, lipid metabolism, spliceosome, cell cycle regulation, and MAPK signaling pathway. The DEPs in cluster 2 are enriched in the stem and are mainly associated with protein biosynthesis, biosynthesis of cofactors, carbon, and energy metabolism. The DEPs in cluster 3 are highly expressed in the primordia and unmatured fruiting bodies and are related to amino acids metabolism, carbon and carbohydrate metabolism, protein biosynthesis and processing, biosynthesis of cofactors, cell cycle regulation, MAPK signaling pathway, ubiquitin-mediated proteolysis, and proteasome. The DEPs in cluster 4 are of the highest abundance in the cap and are mainly associated with spliceosome, endocytosis, nucleocytoplasmic transport, protein processing, oxidative phosphorylation, biosynthesis of cofactors, amino acids metabolism, and lipid metabolism. (4) Conclusions: This research reports the proteome analysis of different developmental stages during the cultivation of the commercially relevant edible fungi the white H. marmoreus. In the mycelium stage, most of the DEPs are associated with cell proliferation, signal response, and mycelium growth. In the primordia and unmatured fruiting bodies stage, the DEPs are mainly involved in biomass increase, cell proliferation, signal response, and differentiation. In the mature fruiting body stage, the DEPs in the stem are largely associated with cell elongation and increase in biomass, and most of the DEPs in the cap are mainly related to pileus expansion. Several carbohydrate-active enzymes, transcription factors, heat shock proteins, and some DEPs involved in MAPK and cAMP signaling pathways were determined. These proteins might play vital roles in metabolic processes and activities. This research can add value to the understanding of mechanisms concerning mushroom development during commercial production.

16.
Ying Yong Sheng Tai Xue Bao ; 32(9): 3061-3069, 2021 Sep.
Artículo en Chino | MEDLINE | ID: mdl-34658190

RESUMEN

Based on the survey data from a 4 hm2 secondary Picea forest plot in the Pangquangou Nature Reserve, Guandi Mountain, Shanxi Province in 2010 and 2015, we analyzed the quantitative characteristics, distribution pattern, and correlation of living and dead standing trees during five years from four aspects, including species composition, diameter class structure, spatial pattern, spatial correlation between different diameter classes of living standing trees and dead standing trees, and intercorrelation between different diameter classes of dead standing trees. The results showed that there were 25811 living standing trees with DBH≥1 cm in the plot in 2010, belonging to 30 species, 22 genera, and 11 families. The distribution of individual diameter class was an inverted "L" type, and the number of individuals decreased in a fracture pattern with the increases of diameter class. During the five years (2010-2015), a total of 2145 dead standing trees were formed, involving 12 species, 10 genera, and 5 families. Most of the dead standing trees were distributed in diameter of 5-10 cm. At the scale of 0-50 m, the spatial distribution of living and dead standing trees was generally similar, indicating that the spatial pattern of dead standing trees was limited by that of living standing trees to some extent. The spatial correlation analysis of each diameter class of dead standing trees and living standing trees showed that with the increases of individual diameter class of trees, the intensified competition for space resources might be the main reason for the generation of dead standing trees. With the increases of diameter class of dead standing trees, the spatial correlation between living and dead standing trees was weakened to varying degrees, indicating that environment might be the key factor for the formation of large diameter class of dead standing trees. For the the dead standing trees, there was an obvious positive correlation between 5 cm≤DBH<20 cm dead standing trees and DBH<5 cm dead standing trees, between 10 cm≤DBH<20 cm dead standing trees and 5 cm≤DBH<10 cm dead standing trees, and between DBH≥20 cm dead standing trees and 5 cm≤DBH<20 cm dead standing trees. Our results indicated that dead standing trees would impact the subsequent dying of living standing trees.


Asunto(s)
Picea , Árboles , China , Bosques , Humanos , Análisis Espacial
17.
Ying Yong Sheng Tai Xue Bao ; 32(6): 2053-2060, 2021 Jun.
Artículo en Chino | MEDLINE | ID: mdl-34212611

RESUMEN

We explored the effects of disturbance densities on the spatial pattern and the association of tree species in the coniferous broadleaved mixed forest in Pangquangou Nature Reserve of Guandi Mountain. Using three factors including canopy density, stand density and number of stumps, we classified the disturbance intensities of different forest stands into three levels, non-disturbance, moderate disturbance, and severe disturbance. The spatial distribution pattern and the association of different tree species were analyzed by spatial point pattern K2 function. The results showed that the diameter distribution of trees in undisturbed plots was inverted 'J' type, while that of moderate disturbance and serious disturbance plots was under bimodal curve distribution. The stand distribution pattern showed a small-scale aggregated distribution under undisturbed and moderately distur-bance, and a random distribution under heavy disturbance. At the small scale, the coniferous and broadleaved species showed no correlation in undisturbed stands, were positively correlated in moderately disturbed stands, and negatively correlated in seriously disturbed stands. At large scale, they were no correlated in both moderately and seriously disturbed stands. The results suggested that abundance of trees with small diameter in the forests was negatively with disturbance intensity, which led to the lower degree of intraspecific aggregation at small scale. Meanwhile, appropriate levels of disturbance would benefit the collaborative use of environmental resources for trees. Our results revealed the impacts of disturbance density on forest community structure and could provide theoretical basis for forest management.


Asunto(s)
Picea , Pinus , Tracheophyta , China , Bosques , Árboles
18.
Ying Yong Sheng Tai Xue Bao ; 32(7): 2363-2370, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-34313053

RESUMEN

According to the technical specifications of CTFS (Center for Tropical Forest Science), 190 sampling points of 4-hm2 plot (GDS plot) in Guandi Mountains of Shanxi Province, China were investigated to examine the spatial distribution pattern of seedlings and 14 soil indicators, including pH value and nutrient indicators. We analyzed the spatial associations between tree regeneration and soil nutrients, explored the mechanism of tree regeneration pattern of secon-dary Picea forest. The results showed that more seedlings survived in the patches with low contents of available N, available K, available Cu, available Fe, available Mn, available Ni and available Zn. Besides available K, the negative correlation between the other six soil nutrient factors and the number of regeneration seedlings of the Ⅱ (2.5 cm

Asunto(s)
Picea , Árboles , China , Bosques , Nutrientes , Suelo
19.
Front Neurorobot ; 15: 642733, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33732132

RESUMEN

This article aims to improve the problem of slow convergence speed, poor global search ability, and unknown time-varying dynamic obstacles in the path planning of ant colony optimization in dynamic environment. An improved ant colony optimization algorithm using time taboo strategy is proposed, namely, time taboo ant colony optimization (TTACO), which uses adaptive initial pheromone distribution, rollback strategy, and pheromone preferential limited update to improve the algorithm's convergence speed and global search ability. For the poor global search ability of the algorithm and the unknown time-varying problem of dynamic obstacles in a dynamic environment, a time taboo strategy is first proposed, based on which a three-step arbitration method is put forward to improve its weakness in global search. For the unknown time-varying dynamic obstacles, an occupancy grid prediction model is proposed based on the time taboo strategy to solve the problem of dynamic obstacle avoidance. In order to improve the algorithm's calculation speed when avoiding obstacles, an ant colony information inheritance mechanism is established. Finally, the algorithm is used to conduct dynamic simulation experiments in a simulated factory environment and is compared with other similar algorithms. The experimental results show that the TTACO can obtain a better path and accelerate the convergence speed of the algorithm in a static environment and can successfully avoid dynamic obstacles in a dynamic environment.

20.
mSphere ; 5(5)2020 09 02.
Artículo en Inglés | MEDLINE | ID: mdl-32878933

RESUMEN

Fungal chemodiversity is well known in part due to the production of diverse analogous compounds by a single biosynthetic gene cluster (BGC). Usually, similar or the same metabolites are produced by closely related fungal species under a given condition, the foundation of fungal chemotaxonomy. Here, we report a rare case of the production of the cyclodepsipeptide beauveriolides (BVDs) in three insect-pathogenic fungi. We found that the more closely related fungi Beauveria bassiana and Beauveria brongniartii produced structurally distinct analogs of BVDs, whereas the less-close relatives B. brongniartii and Cordyceps militaris biosynthesized structurally similar congeners under the same growth condition. It was verified that a conserved BGC containing four genes is responsible for BVD biosynthesis in three fungi, including a polyketide synthase (PKS) for the production of 3-hydroxy fatty acids (FAs) with chain length variations. In contrast to BVD production patterns, phylogenetic analysis of the BGC enzymes or enzyme domains largely resulted in the congruence relationship with fungal speciation. Feeding assays demonstrated that an FA with a chain length of eight carbon atoms was preferentially utilized, whereas an FA with a chain longer than 10 carbon atoms could not be used as a substrate for BVD biosynthesis. Insect survival assays suggested that the contribution of BVDs to fungal virulence might be associated with the susceptibility of insect species. The results of this study enrich the knowledge of fungal secondary metabolic diversity that can question the reliability of fungal chemotaxonomy.IMPORTANCE Fungal chemotaxonomy is an approach to classify fungi based on the fungal production profile of metabolites, especially the secondary metabolites. We found an atypical example that could question the reliability of fungal chemical classifications in this study, i.e., the more closely related entomopathogenic species Beauveria bassiana and Beauveria brongniartii produced structurally different congeners of the cyclodepsipeptide beauveriolides, whereas the rather divergent species B. brongniartii and Cordyceps militaris biosynthesized similar analogs under the same growth condition. The conserved biosynthetic gene cluster (BGC) containing four genes present in each species is responsible for beauveriolide production. In contrast to the compound formation profiles, the phylogenies of biosynthetic enzymes or enzymatic domains show associations with fungal speciation. Dependent on the insect species, production of beauveriolides may contribute to fungal virulence against the susceptible insect hosts. The findings in this study augment the diversity of fungal secondary metabolisms.


Asunto(s)
Beauveria/química , Depsipéptidos/química , Proteínas Fúngicas/química , Animales , Beauveria/clasificación , Vías Biosintéticas , Drosophila melanogaster , Femenino , Proteínas Fúngicas/clasificación , Regulación Fúngica de la Expresión Génica , Larva/microbiología , Mariposas Nocturnas/microbiología , Familia de Multigenes , Filogenia , Virulencia
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